| Protein ZmE2F19 | |
|---|---|
|
ZmE2F19 is a protein in the E2F-DP family.
|
|
| Information | |
| TF Name: | ZmE2F19 |
| Species: | Maize |
| TF Family: | E2F-DP |
| Gene Name(Synonym): | E2F19 |
| Uniprot ID: | B6TKJ8 |
| Subgenome: | 1 |
Protein ZmE2F19
ZmE2F19 is a protein in the E2F-DP family.
| Overview of domains present in v5 transcripts | ||
|---|---|---|
| PF02319 | PF08781 | |
| Zm00001eb004190_T001 |  | |
Protein-DNA Interactions
Meme Logos for Maize v4 Gene IDs
| Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
|---|---|---|---|---|---|
| Zm00001d027709 | DAPseq |  |
sequence | fimo | position |
| Zm00001d027709 | DAPseq |  |
sequence | fimo | position |
| Zm00001d027709 | ChIPseq |  |
sequence | fimo | position |
| Zm00001d027709 | PChIPseq |  |
sequence | fimo | position |
Interactions where ZmE2F19 is the regulator
Interactions where ZmE2F19 is the target
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Zm00001eb004190_T001 from maize genome v5
Amino Acid Sequence
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MVSGAAPNPDGGGAQNTQRPPPLTQAGARTALATPPAVSGGAAHSASTSGGSAGSPPSSRSEQHAPDGAAKGPALGAAPA
AAASTPASDSTFLRLNNLDINGDDAPSSQAPTSKKKRRGTRAVGPDKGNRGLRQFSMKVCEKVESKGRTTYNEVADELVA
EFTDPNNNIEAPDPDNPNAQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSISDIEEMKTELVGLKGRIEK
KSAYLQELQDQYVGLQNLIQRNEQSYGSGNTPSGGVALPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDSYVL
KEMRFCGREQHDSTQESISNGGESSSVSNIYWQHVQHVERPNNGTGRLPSSPPIPGILKGRAKHEH
MVSGAAPNPDGGGAQNTQRPPPLTQAGARTALATPPAVSGGAAHSASTSGGSAGSPPSSRSEQHAPDGAAKGPALGAAPA
AAASTPASDSTFLRLNNLDINGDDAPSSQAPTSKKKRRGTRAVGPDKGNRGLRQFSMKVCEKVESKGRTTYNEVADELVA
EFTDPNNNIEAPDPDNPNAQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSISDIEEMKTELVGLKGRIEK
KSAYLQELQDQYVGLQNLIQRNEQSYGSGNTPSGGVALPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDSYVL
KEMRFCGREQHDSTQESISNGGESSSVSNIYWQHVQHVERPNNGTGRLPSSPPIPGILKGRAKHEH
MVSGAAPNPDGGGAQNTQRPPPLTQAGARTALATPPAVSGGAAHSASTSGGSAGSPPSSRSEQHAPDGAAKGPALGAAPA
AAASTPASDSTFLRLNNLDINGDDAPSSQAPTSKKKRRGTRAVGPDKGNRGLRQFSMKVCEKVESKGRTTYNEVADELVA
EFTDPNNNIEAPDPDNPNAQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSISDIEEMKTELVGLKGRIEK
KSAYLQELQDQYVGLQNLIQRNEQSYGSGNTPSGGVALPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDSYVL
KEMRFCGREQHDSTQESISNGGESSSVSNIYWQHVQHVERPNNGTGRLPSSPPIPGILKGRAKHEH
MVSGAAPNPDGGGAQNTQRPPPLTQAGARTALATPPAVSGGAAHSASTSGGSAGSPPSSRSEQHAPDGAAKGPALGAAPA
AAASTPASDSTFLRLNNLDINGDDAPSSQAPTSKKKRRGTRAVGPDKGNRGLRQFSMKVCEKVESKGRTTYNEVADELVA
EFTDPNNNIEAPDPDNPNAQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSISDIEEMKTELVGLKGRIEK
KSAYLQELQDQYVGLQNLIQRNEQSYGSGNTPSGGVALPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDSYVL
KEMRFCGREQHDSTQESISNGGESSSVSNIYWQHVQHVERPNNGTGRLPSSPPIPGILKGRAKHEH
MVSGAAPNPDGGGAQNTQRPPPLTQAGARTALATPPAVSGGAAHSASTSGGSAGSPPSSRSEQHAPDGAAKGPALGAAPA
AAASTPASDSTFLRLNNLDINGDDAPSSQAPTSKKKRRGTRAVGPDKGNRGLRQFSMKVCEKVESKGRTTYNEVADELVA
EFTDPNNNIEAPDPDNPNAQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSISDIEEMKTELVGLKGRIEK
KSAYLQELQDQYVGLQNLIQRNEQSYGSGNTPSGGVALPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDSYVL
KEMRFCGREQHDSTQESISNGGESSSVSNIYWQHVQHVERPNNGTGRLPSSPPIPGILKGRAKHEH
MVSGAAPNPDGGGAQNTQRPPPLTQAGARTALATPPAVSGGAAHSASTSGGSAGSPPSSRSEQHAPDGAAKGPALGAAPA
AAASTPASDSTFLRLNNLDINGDDAPSSQAPTSKKKRRGTRAVGPDKGNRGLRQFSMKVCEKVESKGRTTYNEVADELVA
EFTDPNNNIEAPDPDNPNAQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSISDIEEMKTELVGLKGRIEK
KSAYLQELQDQYVGLQNLIQRNEQSYGSGNTPSGGVALPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDSYVL
KEMRFCGREQHDSTQESISNGGESSSVSNIYWQHVQHVERPNNGTGRLPSSPPIPGILKGRAKHEH
| Secondary Structure Color Code | |
|---|---|
| BEND | region with high backbone curvature without specific hydrogen bonding |
| HELX_LH_PP_P | left-handed polyproline helix |
| HELX_RH_3T_P | right-handed 3-10 helix |
| HELX_RH_AL_P | right-handed alpha helix |
| HELX_RH_PI_P | right-handed pi helix |
| STRN | beta strand |
| TURN_TY1_P | type I turn |
| UNDETERMINED | no data available |
| Domains Present | |
|---|---|
| PF02319 |
|
| PF08781 |
|
| Hover here to show all domains | |
Nucleotide Sequence
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GATTTCCGTCTCTCTCTCCATTTTG...
GATTTCCGTCTCTCTCTCCATTTTGCGCCCGCACCTCCCCACCTCCACCTCCCCTCCTTTCGGTTGTTGTCTGACTTGTCTCCTACTCTCCTCGCCTTCCCCCTTGCCTTAGGGTTTATCCCGCGCTCCGCCTCGCTCCGTCCCTCCCTGATTCGCGCGATCTCCGCGCGGCCATGGTCTCCGGCGCGGCGCCCAACCCGGACGGGGGCGGCGCCCAAAACACCCAGCGCCCGCCGCCGCTTACTCAGGCCGGGGCCCGGACGGCCCTCGCCACGCCGCCGGCGGTCTCCGGCGGCGCCGCGCACTCCGCTTCTACCAGTGGGGGCAGCGCCGGCTCACCACCGTCCAGCCGCAGCGAGCAGCACGCCCCCGACGGTGCTGCCAAGGGTCCCGCCCTCGGGGCCGCGCCCGCGGCGGCCGCGTCCACGCCGGCCAGCGACAGCACGTTCCTCCGCTTGAATAATCTCGACATCAACGGCGACGACGCGCCGTCGTCGCAGGCTCCTACGAGCAAGAAGAAAAGGAGAGGCACACGGGCAGTGGGTCCTGATAAAGGTAACCGGGGACTGCGCCAGTTTAGTATGAAAGTTTGTGAGAAAGTTGAAAGTAAAGGGAGAACAACATATAATGAGGTGGCAGATGAACTTGTTGCTGAGTTTACAGACCCCAACAATAATATTGAGGCACCAGATCCTGATAACCCTAACGCGCAACAATATGATGAGAAAAATATACGACGAAGAGTTTATGATGCTTTGAATGTTCTGATGGCTATGGACATTATATCTAAAGATAAAAAGGAGATCCAGTGGAAGGGCTTGCCGCGTACTAGTATAAGTGACATTGAAGAAATGAAGACGGAGCTTGTGGGACTGAAAGGTAGGATTGAAAAGAAAAGTGCTTATCTACAGGAGCTACAAGACCAATATGTAGGTCTGCAAAACCTGATTCAACGAAATGAACAGTCATATGGTTCAGGAAACACGCCTTCTGGTGGAGTGGCTTTGCCATTTATCCTAGTTCAGACCCGACCTCATGCTACCGTGGAAGTTGAGATATCAGAAGATATGCAGCTGGTGCATTTTGACTTCAATAGCACCCCATTCGAGCTGCACGACGACTCATACGTCCTAAAAGAAATGCGATTCTGTGGAAGAGAACAACATGACAGCACTCAAGAGTCGATATCAAATGGAGGTGAGAGCTCAAGCGTGTCAAATATTTATTGGCAACACGTACAGCATGTGGAAAGGCCAAACAATGGCACAGGTAGGTTACCGAGCTCACCGCCTATTCCAGGGATCTTGAAAGGGCGTGCGAAGCACGAGCACTAACGCTAGGGTGTTGGTTCACTTTCCTTTTCGTCTGAGCAGTTGGTTTTATTGCATTTCTCCGTTGTGTAAAGGGCCCTGTAAATTATTAGGCAAGCGGGAGCGTAGCTTGATCTAATTTAGCTCTGCACCAGATTGGTAGAACGACGGGTGCTCTAAGTAGTTGTGTAACTATAACTATCCTTGAATCGGTTTCTTTAGTATGGTTGAGAGAAGGGTTGACATGTAATTTTGTAGAGCCTTGTAAAATTAAAATTGTTGATTTCTATCAGGGTGAAATTTCTGGGCACAATCTTTATTTCGTGTTCCTTTTCCCATC
GRMZM2G086072_T01 from maize genome v3
Amino Acid Sequence
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MVSGAAPNPDGGGAQNTQRPPPLTQAGARTALATPPAVSGGAAHSASTSGGSAGSPPSSRSEQHAPDGAAKGPALGAAPA
AAASTPASDSTFLRLNNLDINGDDAPSSQAPTSKKKRRGTRAVGPDKGNRGLRQFSMKVCEKVESKGRTTYNEVADELVA
EFTDPNNNIEAPDPDNPNAQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSISDIEEMKTELVGLKGRIEK
KSAYLQELQDQYVGLQNLIQRNEQSYGSGNTPSGGVALPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDSYVL
KEMRFCGREQHDSTQESISNGGESSSVSNIYWQHVQHVERPNNGTGRLPSSPPIPGILKGRAKHEH
Nucleotide Sequence
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CCTCCCCACCTCCACCTCCCCTCCT...
CCTCCCCACCTCCACCTCCCCTCCTTTCGGTTGTTGTCTGACTTGTCTCCTACTCTCCTCGCCTTCCCCCTTGCCTTAGGGTTTATCCCGCGCTCCGCCTCGCTCCGTCCCTCCCTGATTCGCGCGATCTCCGCGCGGCCATGGTCTCCGGCGCGGCGCCCAACCCGGACGGGGGCGGCGCCCAAAACACCCAGCGCCCGCCGCCGCTTACTCAGGCCGGGGCCCGGACGGCCCTCGCCACGCCGCCGGCGGTCTCCGGCGGCGCCGCGCACTCCGCTTCTACCAGTGGGGGCAGCGCCGGCTCACCACCGTCCAGCCGCAGCGAGCAGCACGCCCCCGACGGTGCTGCCAAGGGTCCCGCCCTCGGGGCCGCGCCCGCGGCGGCCGCGTCCACGCCGGCCAGCGACAGCACGTTCCTCCGCTTGAATAATCTCGACATCAACGGCGACGACGCGCCGTCGTCGCAGGCTCCTACGAGCAAGAAGAAAAGGAGAGGCACACGGGCAGTGGGTCCTGATAAAGGTAACCGGGGACTGCGCCAGTTTAGTATGAAAGTTTGTGAGAAAGTTGAAAGTAAAGGGAGAACAACATATAATGAGGTGGCAGATGAACTTGTTGCTGAGTTTACAGACCCCAACAATAATATTGAGGCACCAGATCCTGATAACCCTAACGCGCAACAATATGATGAGAAAAATATACGACGAAGAGTTTATGATGCTTTGAATGTTCTGATGGCTATGGACATTATATCTAAAGATAAAAAGGAGATCCAGTGGAAGGGCTTGCCGCGTACTAGTATAAGTGACATTGAAGAAATGAAGACGGAGCTTGTGGGACTGAAAGGTAGGATTGAAAAGAAAAGTGCTTATCTACAGGAGCTACAAGACCAATATGTAGGTCTGCAAAACCTGATTCAACGAAATGAACAGTCATATGGTTCAGGAAACACGCCTTCTGGTGGAGTGGCTTTGCCATTTATCCTAGTTCAGACCCGACCTCATGCTACCGTGGAAGTTGAGATATCAGAAGATATGCAGCTGGTGCATTTTGACTTCAATAGCACCCCATTCGAGCTGCACGACGACTCATACGTCCTAAAAGAAATGCGATTCTGTGGAAGAGAACAACATGACAGCACTCAAGAGTCGATATCAAATGGAGGTGAGAGCTCAAGCGTGTCAAATATTTATTGGCAACACGTACAGCATGTGGAAAGGCCAAACAATGGCACAGGTAGGTTACCGAGCTCACCGCCTATTCCAGGGATCTTGAAAGGGCGTGCGAAGCACGAGCACTAACGCTAGGGTGTTGGTTCACTTTCCTTTTCGTCTGAGCAGTTGGTTTTATTGCATTTCTCCGTTGTGTAAAGGGCCCTGTAAATTATTAGGCAAGCGGGAGCGTAGCTTGATCTAATTTAGCTCTGCACCAGATTGGTAGAACGACGGGTGCTCTAAGTAGTTGTGTAACTATAACTATCCTTGAATCGGTTTCTTTAGTATGGTTGAGAGAAGGGTTGACATGTAATTTTGTAGAGCCTTGTAAAATTAAAATTGTTGATTTCTATCAGGGTGAAATTTCTGGGCACAATCTTTATTTCGTGTTCCTTTTCCCATCAGTGAACGTAAA
Zm00001d027709_T001 from maize genome v4
Amino Acid Sequence
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MVSGAAPNPDGGGAQNTQRPPPLTQAGARTALATPPAVSGGAAHSASTSGGSAGSPPSSRSEQHAPDGAAKGPALGAAPA
AAASTPASDSTFLRLNNLDINGDDAPSSQAPTSKKKRRGTRAVGPDKGNRGLRQFSMKVCEKVESKGRTTYNEVADELVA
EFTDPNNNIEAPDPDNPNAQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSISDIEEMKTELVGLKGRIEK
KSAYLQELQDQYVGLQNLIQRNEQSYGSGNTPSGGVALPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDSYVL
KEMRFCGREQHDSTQESISNGGESSSVSNIYWQHVQHVERPNNGTGRLPSSPPIPGILKGRAKHEH
Nucleotide Sequence
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CCACCTCCACCTCCCCTCCTTTCGG...
CCACCTCCACCTCCCCTCCTTTCGGTTGTTGTCTGACTTGTCTCCTACTCTCCTCGCCTTCCCCCTTGCCTTAGGGTTTATCCCGCGCTCCGCCTCGCTCCGTCCCTCCCTGATTCGCGCGATCTCCGCGCGGCCATGGTCTCCGGCGCGGCGCCCAACCCGGACGGGGGCGGCGCCCAAAACACCCAGCGCCCGCCGCCGCTTACTCAGGCCGGGGCCCGGACGGCCCTCGCCACGCCGCCGGCGGTCTCCGGCGGCGCCGCGCACTCCGCTTCTACCAGTGGGGGCAGCGCCGGCTCACCACCGTCCAGCCGCAGCGAGCAGCACGCCCCCGACGGTGCTGCCAAGGGTCCCGCCCTCGGGGCCGCGCCCGCGGCGGCCGCGTCCACGCCGGCCAGCGACAGCACGTTCCTCCGCTTGAATAATCTCGACATCAACGGCGACGACGCGCCGTCGTCGCAGGCTCCTACGAGCAAGAAGAAAAGGAGAGGCACACGGGCAGTGGGTCCTGATAAAGGTAACCGGGGACTGCGCCAGTTTAGTATGAAAGTTTGTGAGAAAGTTGAAAGTAAAGGGAGAACAACATATAATGAGGTGGCAGATGAACTTGTTGCTGAGTTTACAGACCCCAACAATAATATTGAGGCACCAGATCCTGATAACCCTAACGCGCAACAATATGATGAGAAAAATATACGACGAAGAGTTTATGATGCTTTGAATGTTCTGATGGCTATGGACATTATATCTAAAGATAAAAAGGAGATCCAGTGGAAGGGCTTGCCGCGTACTAGTATAAGTGACATTGAAGAAATGAAGACGGAGCTTGTGGGACTGAAAGGTAGGATTGAAAAGAAAAGTGCTTATCTACAGGAGCTACAAGACCAATATGTAGGTCTGCAAAACCTGATTCAACGAAATGAACAGTCATATGGTTCAGGAAACACGCCTTCTGGTGGAGTGGCTTTGCCATTTATCCTAGTTCAGACCCGACCTCATGCTACCGTGGAAGTTGAGATATCAGAAGATATGCAGCTGGTGCATTTTGACTTCAATAGCACCCCATTCGAGCTGCACGACGACTCATACGTCCTAAAAGAAATGCGATTCTGTGGAAGAGAACAACATGACAGCACTCAAGAGTCGATATCAAATGGAGGTGAGAGCTCAAGCGTGTCAAATATTTATTGGCAACACGTACAGCATGTGGAAAGGCCAAACAATGGCACAGGTAGGTTACCGAGCTCACCGCCTATTCCAGGGATCTTGAAAGGGCGTGCGAAGCACGAGCACTAACGCTAGGGTGTTGGTTCACTTTCCTTTTCGTCTGAGCAGTTGGTTTTATTGCATTTCTCCGTTGTGTAAAGGGCCCTGTAAATTATTAGGCAAGCGGGAGCGTAGCTTGATCTAATTTAGCTCTGCACCAGATTGGTAGAACGACGGGTGCTAACTATCCTTGAATCGGTTTCTTTAGTATGGTTGAGAGAAGGGTTGACATGTAATTTTGTAGAGCCTTGTAAAATTAAAATTGTTGATTTCTATCAGGGTGAAATTTCTGGGCACAATCTTTATTT
Zm00001d027709_T002 from maize genome v4
Amino Acid Sequence
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MVSGAAPNPDGGGAQNTQRPPPLTQAGARTALATPPAVSGGAAHSASTSGGSAGSPPSSRSEQHAPDGAAKGPALGAAPA
AAASTPASDSTFLRLNNLDINGDDAPSSQAPTSKKKRRGTRAVGPDKGNRGLRQFSMKVCEKVESKGRTTYNEVADELVA
EFTDPNNNIEAPDPDNPNAQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSISDIEEMKTELVGLKGRIEK
KSAYLQELQDQYVGLQNLIQRNEQSYGSGNTPSGGVALPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDSYVL
KEMRFCGREQHDSTQESISNGGESSSVSNIYWQHVQHVERPNNGTGRLPSSPPIPGILKGRAKHEH
Nucleotide Sequence
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CCACCTCCACCTCCCCTCCTTTCGG...
CCACCTCCACCTCCCCTCCTTTCGGTTGTTGTCTGACTTGTCTCCTACTCTCCTCGCCTTCCCCCTTGCCTTAGGGTTTATCCCGCGCTCCGCCTCGCTCCGTCCCTCCCTGATTCGCGCGATCTCCGCGCGGCCATGGTCTCCGGCGCGGCGCCCAACCCGGACGGGGGCGGCGCCCAAAACACCCAGCGCCCGCCGCCGCTTACTCAGGCCGGGGCCCGGACGGCCCTCGCCACGCCGCCGGCGGTCTCCGGCGGCGCCGCGCACTCCGCTTCTACCAGTGGGGGCAGCGCCGGCTCACCACCGTCCAGCCGCAGCGAGCAGCACGCCCCCGACGGTGCTGCCAAGGGTCCCGCCCTCGGGGCCGCGCCCGCGGCGGCCGCGTCCACGCCGGCCAGCGACAGCACGTTCCTCCGCTTGAATAATCTCGACATCAACGGCGACGACGCGCCGTCGTCGCAGGCTCCTACGAGCAAGAAGAAAAGGAGAGGCACACGGGCAGTGGGTCCTGATAAAGGTAACCGGGGACTGCGCCAGTTTAGTATGAAAGTTTGTGAGAAAGTTGAAAGTAAAGGGAGAACAACATATAATGAGGTGGCAGATGAACTTGTTGCTGAGTTTACAGACCCCAACAATAATATTGAGGCACCAGATCCTGATAACCCTAACGCGCAACAATATGATGAGAAAAATATACGACGAAGAGTTTATGATGCTTTGAATGTTCTGATGGCTATGGACATTATATCTAAAGATAAAAAGGAGATCCAGTGGAAGGGCTTGCCGCGTACTAGTATAAGTGACATTGAAGAAATGAAGACGGAGCTTGTGGGACTGAAAGGTAGGATTGAAAAGAAAAGTGCTTATCTACAGGAGCTACAAGACCAATATGTAGGTCTGCAAAACCTGATTCAACGAAATGAACAGTCATATGGTTCAGGAAACACGCCTTCTGGTGGAGTGGCTTTGCCATTTATCCTAGTTCAGACCCGACCTCATGCTACCGTGGAAGTTGAGATATCAGAAGATATGCAGCTGGTGCATTTTGACTTCAATAGCACCCCATTCGAGCTGCACGACGACTCATACGTCCTAAAAGAAATGCGATTCTGTGGAAGAGAACAACATGACAGCACTCAAGAGTCGATATCAAATGGAGGTGAGAGCTCAAGCGTGTCAAATATTTATTGGCAACACGTACAGCATGTGGAAAGGCCAAACAATGGCACAGGTAGGTTACCGAGCTCACCGCCTATTCCAGGGATCTTGAAAGGGCGTGCGAAGCACGAGCACTAACGCTAGGGTGTTGGTTCACTTTCCTTTTCGTCTGAGCAGTTGGTTTTATTGCATTTCTCCGTTGTGTAAAGGGCCCTGTAAATTATTAGGCAAGCGGGAGCGTAGCTTGATCTAATTTAGCTCTGCACCAGATTGGTAGAACGACGGGTGCTCTAAGTAGTTGTGTAACTATAACTATCCTTGAATCGGTTTCTTTAGTATGGTTGAGAGAAGGGTTGACATGTAATTTTGTAGAGCCTTGTAAAATTAAAATTGTTGATTTCTATCAGGGTGAAATTTCTGGGCACAATCTTTATTTCGTGTTCCTTTTCCCATCAGTGAACGTAAA
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